Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| heme-degrading monooxygenase hmoa | SAMN05421827_105103 | Not Available | + | 1980294 - 1980638 | 12838.2 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase small subunit | SAMN05421827_105104 | Not Available | + | 1980716 - 1981300 | 21637.5 |
| molybdate transport system atp-binding protein | SAMN05421827_105105 | Not Available | + | 1981300 - 1982763 | 55011.6 |
| 3-isopropylmalate dehydrogenase | SAMN05421827_105106 | Not Available | + | 1982890 - 1983981 | 40217.4 |
| 2-isopropylmalate synthase | SAMN05421827_105107 | Not Available | + | 1983992 - 1985152 | 42764.1 |
| l-threonine ammonia-lyase | SAMN05421827_105108 | Not Available | + | 1985426 - 1986676 | 46002.8 |
| hypothetical protein | SAMN05421827_105109 | Not Available | + | 1986815 - 1987033 | 8157.87 |
| hypothetical protein | SAMN05421827_105110 | Not Available | - | 1987239 - 1988144 | 32944.3 |
| hypothetical protein | SAMN05421827_105111 | Not Available | + | 1988259 - 1988474 | 7493.12 |
| hypothetical protein | SAMN05421827_105112 | Not Available | + | 1988474 - 1990567 | 79607.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.