Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fecr protein | SAMN05421827_10583 | Not Available | - | 1961188 - 1962369 | 43587.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421827_10584 | Not Available | - | 1962472 - 1963050 | 22748.3 |
| chorismate mutase | SAMN05421827_10585 | Not Available | + | 1963572 - 1963943 | 13917.0 |
| Trna-arg | Not Available | Not Available | + | 1964301 - 1964374 | Not Available |
| peroxiredoxin | SAMN05421827_10587 | Not Available | - | 1964474 - 1964938 | 16982.1 |
| dtdp-4-dehydrorhamnose reductase | SAMN05421827_10588 | Not Available | - | 1965023 - 1965925 | 33366.0 |
| hypothetical protein | SAMN05421827_10589 | Not Available | + | 1966020 - 1966538 | 18938.2 |
| atp synthase f1 subcomplex beta subunit | SAMN05421827_10590 | Not Available | + | 1966741 - 1968243 | 54190.0 |
| f-type h+-transporting atpase subunit epsilon | SAMN05421827_10591 | Not Available | + | 1968325 - 1968570 | 8730.64 |
| hypothetical protein | SAMN05421827_10592 | Not Available | + | 1969397 - 1969531 | 4948.35 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.