Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphoinositide phospholipase c, ca2+-dependent | SAMN05421827_10573 | Not Available | - | 1943472 - 1944536 | 39996.9 |
| starch-binding associating with outer membrane | SAMN05421827_10574 | Not Available | - | 1944546 - 1946135 | 59813.4 |
| iron complex outermembrane recepter protein | SAMN05421827_10575 | Not Available | - | 1946148 - 1949135 | 108826.0 |
| arsenical pump membrane protein | SAMN05421827_10576 | Not Available | + | 1949472 - 1950716 | 43793.9 |
| hypothetical protein | SAMN05421827_10577 | Not Available | + | 1950858 - 1951013 | 5992.29 |
| peroxiredoxin | SAMN05421827_10578 | Not Available | - | 1951261 - 1952409 | 42584.9 |
| carboxyl-terminal processing protease | SAMN05421827_10579 | Not Available | - | 1952420 - 1954051 | 59769.1 |
| ahpc/tsa family protein | SAMN05421827_10580 | Not Available | - | 1954057 - 1956018 | 74289.5 |
| susd family protein | SAMN05421827_10581 | Not Available | - | 1956057 - 1957430 | 51065.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421827_10582 | Not Available | - | 1957436 - 1961047 | 132501.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.