Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421827_10563 | Not Available | + | 1926013 - 1928064 | 76976.3 |
| endoglucanase | SAMN05421827_10564 | Not Available | - | 1928252 - 1930012 | 64988.2 |
| hypothetical protein | SAMN05421827_10565 | Not Available | - | 1930009 - 1930557 | 20190.6 |
| hypothetical protein | SAMN05421827_10566 | Not Available | - | 1930780 - 1931892 | 39514.8 |
| starch-binding associating with outer membrane | SAMN05421827_10567 | Not Available | - | 1931899 - 1933512 | 59191.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421827_10568 | Not Available | - | 1933499 - 1936972 | 127585.0 |
| fecr protein | SAMN05421827_10569 | Not Available | - | 1937175 - 1938338 | 42697.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421827_10570 | Not Available | - | 1939490 - 1940074 | 22872.6 |
| php domain-containing protein | SAMN05421827_10571 | Not Available | - | 1940652 - 1941824 | 43305.1 |
| alkaline phosphatase | SAMN05421827_10572 | Not Available | - | 1942060 - 1943463 | 51552.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.