Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ferritin-like metal-binding protein ycie | SAMN05421827_10553 | Not Available | + | 1915619 - 1916176 | 20270.0 |
| hypothetical protein | SAMN05421827_10554 | Not Available | + | 1916474 - 1916947 | 16775.3 |
| hypothetical protein | SAMN05421827_10555 | Not Available | - | 1916944 - 1917552 | 22645.2 |
| hypothetical protein | SAMN05421827_10556 | Not Available | + | 1917743 - 1919305 | 57578.0 |
| hypothetical protein | SAMN05421827_10557 | Not Available | + | 1919362 - 1919658 | 11263.2 |
| uncharacterized conserved protein yece, duf72 family | SAMN05421827_10558 | Not Available | + | 1919698 - 1920423 | 28601.0 |
| response regulator receiver domain-containing protein | SAMN05421827_10559 | Not Available | - | 1920667 - 1921011 | 12577.0 |
| pas domain s-box-containing protein | SAMN05421827_10560 | Not Available | - | 1921022 - 1922509 | 56405.8 |
| paraquat-inducible protein a | SAMN05421827_10561 | Not Available | + | 1923216 - 1924487 | 47606.0 |
| paraquat-inducible protein a | SAMN05421827_10562 | Not Available | + | 1924500 - 1925846 | 50024.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.