Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4-alpha-glucanotransferase/malto- oligosyltrehalose synthase,tigr02401 | SAMN05421827_10543 | Not Available | - | 1902820 - 1906872 | 155398.0 |
| maltooligosyltrehalose trehalohydrolase | SAMN05421827_10544 | Not Available | - | 1906865 - 1908724 | 70817.3 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421827_10545 | Not Available | + | 1908860 - 1909867 | 35209.9 |
| hypothetical protein | SAMN05421827_10546 | Not Available | - | 1910123 - 1910917 | 28567.2 |
| hypothetical protein | SAMN05421827_10547 | Not Available | - | 1910965 - 1911156 | 6812.3 |
| catalase | SAMN05421827_10548 | Not Available | - | 1911356 - 1913548 | 80976.9 |
| ferritin-like metal-binding protein ycie | SAMN05421827_10549 | Not Available | - | 1913564 - 1914118 | 19852.6 |
| hypothetical protein | SAMN05421827_10550 | Not Available | + | 1914327 - 1914437 | 4022.97 |
| nicotinamide-nucleotide amidase | SAMN05421827_10551 | Not Available | + | 1914434 - 1914811 | 13471.2 |
| hypothetical protein | SAMN05421827_10552 | Not Available | + | 1914827 - 1915504 | 26016.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.