Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h-dependent fmn reductase | SAMN05421827_10531 | Not Available | + | 1889898 - 1890419 | 19601.6 |
| pas domain s-box-containing protein | SAMN05421827_10534 | Not Available | + | 1891764 - 1893515 | 66050.6 |
| acyl-coa hydrolase | SAMN05421827_10535 | Not Available | - | 1893843 - 1894319 | 17928.0 |
| glycosyl-hydrolase 97 c-terminal, oligomerisation | SAMN05421827_10536 | Not Available | - | 1894875 - 1897019 | 80574.5 |
| hypothetical protein | SAMN05421827_10537 | Not Available | - | 1897521 - 1898774 | 48573.2 |
| putative redox protein | SAMN05421827_10538 | Not Available | - | 1898865 - 1899245 | 13836.8 |
| ytxh-like protein | SAMN05421827_10539 | Not Available | + | 1899426 - 1899791 | 13230.9 |
| uncharacterized sam-binding protein ycdf, duf218 family | SAMN05421827_10540 | Not Available | + | 1899841 - 1900584 | 28088.7 |
| gtp-binding protein | SAMN05421827_10541 | Not Available | - | 1900685 - 1901680 | 35676.1 |
| adenylate kinase | SAMN05421827_10542 | Not Available | - | 1901870 - 1902445 | 21252.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.