Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| beta-glucosidase | SAMN05421827_10521 | Not Available | - | 1874614 - 1877244 | 97440.0 |
| alpha-l-fucosidase | SAMN05421827_10522 | Not Available | - | 1877286 - 1878707 | 54565.6 |
| starch-binding associating with outer membrane | SAMN05421827_10523 | Not Available | - | 1878764 - 1880368 | 59462.5 |
| iron complex outermembrane recepter protein | SAMN05421827_10524 | Not Available | - | 1880389 - 1883655 | 119609.0 |
| sugar kinase of the nbd/hsp70 family, may contain an n-terminal hth domain | SAMN05421827_10525 | Not Available | - | 1883772 - 1884962 | 42886.1 |
| signal peptidase i | SAMN05421827_10526 | Not Available | - | 1885111 - 1886304 | 45402.5 |
| 4-hydroxy-tetrahydrodipicolinate reductase | SAMN05421827_10527 | Not Available | - | 1886437 - 1887171 | 27226.4 |
| hypothetical protein | SAMN05421827_10528 | Not Available | - | 1887285 - 1887998 | 26529.5 |
| chromosome partitioning protein, parb family | SAMN05421827_10529 | Not Available | - | 1887998 - 1888906 | 34017.1 |
| chromosome partitioning protein | SAMN05421827_10530 | Not Available | - | 1888914 - 1889717 | 29466.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.