Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421827_10511 | Not Available | + | 1863554 - 1863814 | 10043.0 |
| atp-binding cassette, subfamily b | SAMN05421827_10512 | Not Available | - | 1863811 - 1865580 | 66747.7 |
| trna pseudouridine38-40 synthase | SAMN05421827_10513 | Not Available | - | 1865698 - 1866423 | 27096.4 |
| protein of unknown function | SAMN05421827_10514 | Not Available | + | 1866703 - 1867113 | 15068.8 |
| protein of unknown function | SAMN05421827_10515 | Not Available | + | 1867142 - 1867690 | 21057.6 |
| hypothetical protein | SAMN05421827_10516 | Not Available | + | 1868193 - 1868558 | 14026.9 |
| atp-dependent rna helicase dead | SAMN05421827_10517 | Not Available | + | 1868832 - 1870742 | 70378.4 |
| hypothetical protein | SAMN05421827_10518 | Not Available | - | 1870824 - 1871156 | 13097.3 |
| bacillithiol biosynthesis cysteine-adding enzyme bshc | SAMN05421827_10519 | Not Available | + | 1871458 - 1873044 | 60555.4 |
| malate/lactate/ureidoglycolate dehydrogenase, ldh2 family | SAMN05421827_10520 | Not Available | + | 1873104 - 1874189 | 39011.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.