Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421827_1051 | Not Available | + | 1849868 - 1850007 | 5111.01 |
| aerobic c4-dicarboxylate transport protein | SAMN05421827_1052 | Not Available | - | 1850226 - 1851476 | 44949.7 |
| cyanophycinase | SAMN05421827_1053 | Not Available | - | 1851644 - 1852483 | 30746.7 |
| beta-aspartyl-peptidase (threonine type) | SAMN05421827_1054 | Not Available | - | 1852483 - 1853508 | 36022.6 |
| cyanophycinase | SAMN05421827_1055 | Not Available | - | 1853515 - 1854579 | 37891.7 |
| starch-binding associating with outer membrane | SAMN05421827_1056 | Not Available | - | 1854663 - 1856051 | 51258.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421827_1057 | Not Available | - | 1856062 - 1859460 | 124906.0 |
| fecr protein | SAMN05421827_1058 | Not Available | - | 1859537 - 1860715 | 43804.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421827_1059 | Not Available | - | 1860811 - 1861395 | 22341.0 |
| glycosyl hydrolases family 2, tim barrel domain | SAMN05421827_10510 | Not Available | - | 1861509 - 1863335 | 68370.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.