Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidylprolyl isomerase/fkbp-type peptidyl-prolyl cis-trans isomerase fkpa/fkbp-type peptidyl-prolyl cis-trans isomerase fklb | SAMN05421827_104299 | Not Available | + | 1837983 - 1838444 | 16283.5 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | SAMN05421827_104300 | Not Available | + | 1838448 - 1839365 | 33186.5 |
| deoxyribodipyrimidine photo-lyase | SAMN05421827_104301 | Not Available | - | 1839355 - 1840656 | 51565.5 |
| hypothetical protein | SAMN05421827_104302 | Not Available | - | 1840798 - 1841700 | 33268.4 |
| deoxyribodipyrimidine photo-lyase | SAMN05421827_104303 | Not Available | + | 1841869 - 1843143 | 48310.0 |
| 2-oxoglutarate dehydrogenase e1 component | SAMN05421827_104304 | Not Available | + | 1843354 - 1846152 | 105110.0 |
| 2-oxoglutarate dehydrogenase e2 component (dihydrolipoamide succinyltransferase) | SAMN05421827_104305 | Not Available | + | 1846256 - 1847482 | 43346.5 |
| protein of unknown function | SAMN05421827_104306 | Not Available | + | 1847639 - 1847905 | 10271.8 |
| protein of unknown function | SAMN05421827_104307 | Not Available | - | 1848046 - 1848732 | 25394.7 |
| protein of unknown function | SAMN05421827_104308 | Not Available | - | 1848958 - 1849476 | 19855.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.