Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gamma-glutamyltranspeptidase / glutathione hydrolase | SAMN05421827_104289 | Not Available | + | 1825313 - 1827034 | 61884.1 |
| ompa-ompf porin, oop family | SAMN05421827_104290 | Not Available | + | 1827374 - 1828696 | 47099.7 |
| hypothetical protein | SAMN05421827_104291 | Not Available | - | 1829125 - 1830087 | 37328.2 |
| dna-binding transcriptional regulator, marr family | SAMN05421827_104292 | Not Available | + | 1830213 - 1830647 | 16471.9 |
| 3-hydroxyacyl-coa dehydrogenase | SAMN05421827_104293 | Not Available | + | 1830724 - 1833129 | 88996.4 |
| four helix bundle protein | SAMN05421827_104294 | Not Available | + | 1833201 - 1833572 | 13750.6 |
| acetyl-coa acyltransferase | SAMN05421827_104295 | Not Available | + | 1833713 - 1834888 | 41594.3 |
| acyl-coa dehydrogenase | SAMN05421827_104296 | Not Available | + | 1835092 - 1836885 | 65829.2 |
| hypothetical protein | SAMN05421827_104297 | Not Available | + | 1836995 - 1837117 | 4681.86 |
| fkbp-type peptidyl-prolyl cis-trans isomerase fkpa | SAMN05421827_104298 | Not Available | + | 1837232 - 1837678 | 16217.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.