Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone htpg | SAMN05421827_104279 | Not Available | - | 1810350 - 1812236 | 71118.7 |
| protein of unknown function | SAMN05421827_104280 | Not Available | - | 1812635 - 1813372 | 27737.4 |
| response regulator receiver domain-containing protein | SAMN05421827_104281 | Not Available | - | 1813479 - 1813871 | 14771.1 |
| badf-type atpase | SAMN05421827_104282 | Not Available | - | 1813979 - 1814842 | 32037.1 |
| outer membrane protein tolc | SAMN05421827_104283 | Not Available | - | 1814959 - 1816269 | 48418.7 |
| multidrug efflux pump | SAMN05421827_104284 | Not Available | - | 1816271 - 1819381 | 113996.0 |
| membrane fusion protein, multidrug efflux system | SAMN05421827_104285 | Not Available | - | 1819384 - 1820481 | 38737.0 |
| predicted metalloprotease, contains c-terminal pdz domain | SAMN05421827_104286 | Not Available | + | 1820859 - 1822637 | 65770.3 |
| hypothetical protein | SAMN05421827_104287 | Not Available | - | 1822838 - 1823311 | 16911.4 |
| long-chain acyl-coa synthetase | SAMN05421827_104288 | Not Available | + | 1823566 - 1825341 | 66483.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.