Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gliding motility-associated c-terminal domain-containing protein | SAMN05421827_104269 | Not Available | + | 1787673 - 1800323 | 427405.0 |
| type ix secretion system membrane protein, porp/sprf family | SAMN05421827_104270 | Not Available | + | 1800362 - 1801363 | 35909.6 |
| wd40-like beta propeller repeat | SAMN05421827_104271 | Not Available | + | 1801436 - 1803436 | 75032.7 |
| thiopeptide-type bacteriocin biosynthesis domain-containing protein | SAMN05421827_104272 | Not Available | + | 1803759 - 1806557 | 107426.0 |
| histidine kinase | SAMN05421827_104273 | Not Available | - | 1806554 - 1807669 | 43108.1 |
| hypothetical protein | SAMN05421827_104274 | Not Available | + | 1807816 - 1807965 | 5528.75 |
| hypothetical protein | SAMN05421827_104275 | Not Available | + | 1808015 - 1808155 | 5232.38 |
| dna-binding response regulator, lytr/algr family | SAMN05421827_104276 | Not Available | - | 1808205 - 1808951 | 28083.0 |
| hypothetical protein | SAMN05421827_104277 | Not Available | + | 1809323 - 1809697 | 14777.6 |
| hypothetical protein | SAMN05421827_104278 | Not Available | + | 1809717 - 1810208 | 18910.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.