Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase subunit 2 | SAMN05421827_104249 | Not Available | + | 1763377 - 1764609 | 46115.1 |
| cytochrome c oxidase subunit 1 | SAMN05421827_104250 | Not Available | + | 1764633 - 1766513 | 70271.7 |
| cytochrome c oxidase assembly protein subunit 15 | SAMN05421827_104251 | Not Available | + | 1766597 - 1767655 | 39495.4 |
| protoheme ix farnesyltransferase | SAMN05421827_104252 | Not Available | + | 1767668 - 1768576 | 33717.2 |
| cytochrome c oxidase subunit 3 | SAMN05421827_104253 | Not Available | + | 1768580 - 1769158 | 21429.0 |
| cytochrome c oxidase subunit 3 | SAMN05421827_104254 | Not Available | + | 1769190 - 1769897 | 26767.9 |
| cytochrome c oxidase subunit iv | SAMN05421827_104255 | Not Available | + | 1769923 - 1770276 | 13301.7 |
| protein sco1/2 | SAMN05421827_104256 | Not Available | + | 1770276 - 1770971 | 26170.8 |
| putative membrane protein | SAMN05421827_104257 | Not Available | + | 1771041 - 1771583 | 20428.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421827_104258 | Not Available | + | 1771768 - 1772367 | 23106.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.