Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| signal transducer regulating beta-lactamase production, contains metallopeptidase domain | SAMN05421827_104239 | Not Available | + | 1747153 - 1749030 | 71836.7 |
| outer membrane receptor proteins, mostly fe transport | SAMN05421827_104240 | Not Available | + | 1748993 - 1751242 | 85633.5 |
| surface antigen | SAMN05421827_104241 | Not Available | - | 1751542 - 1752672 | 42575.7 |
| homospermidine synthase (spermidine-specific) | SAMN05421827_104242 | Not Available | + | 1753830 - 1754810 | 36955.2 |
| cytochrome c2 | SAMN05421827_104243 | Not Available | + | 1755066 - 1756367 | 47888.3 |
| prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit | SAMN05421827_104244 | Not Available | + | 1756416 - 1759454 | 110886.0 |
| quinol:cytochrome c oxidoreductase quinone-binding subunit 1 | SAMN05421827_104245 | Not Available | + | 1759481 - 1760953 | 55865.3 |
| protein of unknown function | SAMN05421827_104246 | Not Available | + | 1760956 - 1761492 | 20026.4 |
| cytochrome c oxidase, cbb3-type, subunit iii | SAMN05421827_104247 | Not Available | + | 1761464 - 1762069 | 21987.1 |
| hypothetical protein | SAMN05421827_104248 | Not Available | + | 1762084 - 1763307 | 46339.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.