Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 2 | SAMN05421827_104229 | Not Available | + | 1738267 - 1739232 | 36446.8 |
| acetyl esterase/lipase | SAMN05421827_104230 | Not Available | + | 1739243 - 1740157 | 33572.6 |
| protein of unknown function | SAMN05421827_104231 | Not Available | + | 1740199 - 1740999 | 28984.0 |
| hypothetical protein | SAMN05421827_104232 | Not Available | + | 1741324 - 1742151 | 30603.6 |
| cysteine-rich secretory protein family protein | SAMN05421827_104233 | Not Available | + | 1742218 - 1742700 | 17657.2 |
| chitinase | SAMN05421827_104234 | Not Available | - | 1742667 - 1743764 | 40633.6 |
| regulator of sirc expression, contains transglutaminase-like and tpr domains | SAMN05421827_104235 | Not Available | - | 1743816 - 1744685 | 33496.8 |
| predicted o-methyltransferase yrrm | SAMN05421827_104236 | Not Available | + | 1744730 - 1745512 | 29830.8 |
| uncharacterized membrane protein | SAMN05421827_104237 | Not Available | + | 1745517 - 1746185 | 25048.9 |
| predicted transcriptional regulator | SAMN05421827_104238 | Not Available | + | 1746788 - 1747156 | 14321.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.