Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05421827_104219 | Not Available | + | 1727472 - 1728362 | 33713.8 |
| crossover junction endodeoxyribonuclease ruvc | SAMN05421827_104220 | Not Available | - | 1728458 - 1729093 | 23135.6 |
| hypothetical protein | SAMN05421827_104221 | Not Available | + | 1729095 - 1730072 | 37564.4 |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN05421827_104222 | Not Available | + | 1730050 - 1731186 | 42710.1 |
| peptide/nickel transport system permease protein | SAMN05421827_104223 | Not Available | + | 1731186 - 1732328 | 41548.6 |
| hypothetical protein | SAMN05421827_104224 | Not Available | - | 1732445 - 1733392 | 35200.2 |
| ycei-like domain-containing protein | SAMN05421827_104225 | Not Available | - | 1733397 - 1733939 | 20153.4 |
| hypothetical protein | SAMN05421827_104226 | Not Available | - | 1733997 - 1734359 | 12758.4 |
| glucose-6-phosphate isomerase | SAMN05421827_104227 | Not Available | - | 1734817 - 1736463 | 61418.8 |
| amidohydrolase | SAMN05421827_104228 | Not Available | + | 1736693 - 1737997 | 46678.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.