Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| maltose o-acetyltransferase | SAMN05421827_104187 | Not Available | - | 1694417 - 1695031 | 23097.8 |
| cupin-like domain-containing protein | SAMN05421827_104188 | Not Available | - | 1695136 - 1696014 | 33858.1 |
| protein of unknown function | SAMN05421827_104189 | Not Available | - | 1696144 - 1696929 | 29938.7 |
| uncaracterized surface protein containing fasciclin (fas1) repeats | SAMN05421827_104190 | Not Available | - | 1697227 - 1697814 | 20693.5 |
| short-chain dehydrogenase | SAMN05421827_104192 | Not Available | - | 1698099 - 1698881 | 28428.4 |
| oxygen-independent coproporphyrinogen-3 oxidase | SAMN05421827_104193 | Not Available | - | 1698980 - 1700020 | 39209.4 |
| protein of unknown function | SAMN05421827_104194 | Not Available | + | 1700605 - 1701582 | 37710.1 |
| uroporphyrinogen-iii synthase | SAMN05421827_104195 | Not Available | + | 1701596 - 1702366 | 29397.4 |
| gliding motility-associated lipoprotein gldk | SAMN05421827_104196 | Not Available | + | 1702541 - 1703917 | 51332.4 |
| gliding motility-associated protein gldl | SAMN05421827_104197 | Not Available | + | 1703955 - 1704761 | 28760.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.