Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-[acyl-carrier-protein] synthase-3 | SAMN05421827_104167 | Not Available | + | 1672724 - 1673770 | 38164.4 |
| hypothetical protein | SAMN05421827_104168 | Not Available | - | 1674055 - 1676508 | 93890.1 |
| hypothetical protein | SAMN05421827_104169 | Not Available | - | 1676474 - 1677499 | 39673.5 |
| d-tyrosyl-trna(tyr) deacylase | SAMN05421827_104170 | Not Available | + | 1677529 - 1677981 | 16283.0 |
| dolichyl-phosphate-mannose-protein mannosyltransferase | SAMN05421827_104171 | Not Available | + | 1678071 - 1679612 | 59209.1 |
| ntp pyrophosphatase, house-cleaning of non-canonical ntps | SAMN05421827_104172 | Not Available | + | 1679602 - 1679931 | 12463.9 |
| protein of unknown function | SAMN05421827_104173 | Not Available | - | 1679974 - 1680285 | 12041.4 |
| hypothetical protein | SAMN05421827_104174 | Not Available | + | 1680393 - 1680656 | 9778.28 |
| hypothetical protein | SAMN05421827_104175 | Not Available | + | 1680669 - 1681220 | 21140.1 |
| tetratricopeptide repeat-containing protein | SAMN05421827_104176 | Not Available | - | 1681314 - 1683137 | 69946.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.