Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-[acyl-carrier-protein] synthase-3 | SAMN05421827_104155 | Not Available | - | 1663821 - 1664819 | 36025.9 |
| glycerol-3-phosphate acyltransferase plsx | SAMN05421827_104156 | Not Available | - | 1664829 - 1665746 | 32776.0 |
| large subunit ribosomal protein l32 | SAMN05421827_104157 | Not Available | - | 1665867 - 1666058 | 7104.6 |
| uncharacterized metal-binding protein yced, duf177 family | SAMN05421827_104158 | Not Available | - | 1666074 - 1666604 | 20431.2 |
| thiosulfate/3-mercaptopyruvate sulfurtransferase | SAMN05421827_104159 | Not Available | - | 1666737 - 1667576 | 30453.3 |
| predicted arabinose efflux permease, mfs family | SAMN05421827_104160 | Not Available | - | 1667774 - 1668946 | 42585.1 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | SAMN05421827_104162 | Not Available | - | 1669188 - 1670267 | 39132.8 |
| 16s rrna (adenine1518-n6/adenine1519-n6)-dimethyltransferase | SAMN05421827_104163 | Not Available | + | 1670423 - 1671208 | 29881.3 |
| thioredoxin | SAMN05421827_104165 | Not Available | + | 1671563 - 1672162 | 22446.1 |
| atp-dependent clp protease adaptor protein clps | SAMN05421827_104166 | Not Available | - | 1672293 - 1672574 | 10936.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.