Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2-oxoisovalerate dehydrogenase e1 component | SAMN05421827_104145 | Not Available | - | 1653940 - 1655916 | 73971.9 |
| l-lactate dehydrogenase complex protein lldf | SAMN05421827_104146 | Not Available | - | 1655947 - 1657332 | 52177.7 |
| protein of unknown function | SAMN05421827_104147 | Not Available | - | 1657857 - 1658066 | 8238.17 |
| peptidase family m28 | SAMN05421827_104148 | Not Available | - | 1658173 - 1659807 | 59998.4 |
| ribose 5-phosphate isomerase b | SAMN05421827_104149 | Not Available | - | 1659833 - 1660270 | 15843.7 |
| sec-independent protein translocase protein tatc | SAMN05421827_104150 | Not Available | - | 1660316 - 1661197 | 33049.4 |
| hypothetical protein | SAMN05421827_104151 | Not Available | - | 1661313 - 1661471 | 5943.13 |
| hypothetical protein | SAMN05421827_104152 | Not Available | - | 1661550 - 1661672 | 4710.88 |
| acetyl-coa carboxylase, biotin carboxylase subunit | SAMN05421827_104153 | Not Available | - | 1661768 - 1663108 | 49519.1 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | SAMN05421827_104154 | Not Available | - | 1663225 - 1663701 | 17008.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.