Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pp_01437 | SAMN05421827_104133 | Not Available | - | 1641178 - 1642602 | Not Available |
| spfh domain / band 7 family protein | SAMN05421827_104134 | Not Available | - | 1642664 - 1643761 | 41731.1 |
| predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domains | SAMN05421827_104136 | Not Available | + | 1644724 - 1645779 | 40884.5 |
| peptide chain release factor 3 | SAMN05421827_104137 | Not Available | - | 1646106 - 1647689 | 60098.6 |
| helix-turn-helix domain-containing protein | SAMN05421827_104139 | Not Available | + | 1648162 - 1650432 | 86331.0 |
| gxxexxy protein | SAMN05421827_104140 | Not Available | + | 1650512 - 1650889 | 14359.8 |
| sprt-like family protein | SAMN05421827_104141 | Not Available | + | 1650996 - 1651574 | 22842.6 |
| uncharacterized conserved protein, duf433 family | SAMN05421827_104142 | Not Available | + | 1651620 - 1651856 | 8972.88 |
| predicted nuclease, contains pin domain, potential toxin-antitoxin system component | SAMN05421827_104143 | Not Available | + | 1651857 - 1652204 | 13552.3 |
| adenine deaminase | SAMN05421827_104144 | Not Available | - | 1652205 - 1653842 | 59708.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.