Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN05421827_104112 | Not Available | + | 1619585 - 1622764 | 116994.0 |
| susd family protein | SAMN05421827_104113 | Not Available | + | 1622777 - 1624294 | 57211.9 |
| hypothetical protein | SAMN05421827_104114 | Not Available | + | 1624322 - 1625008 | 25649.5 |
| protein of unknown function | SAMN05421827_104115 | Not Available | + | 1625022 - 1626005 | 36756.4 |
| protein of unknown function | SAMN05421827_104116 | Not Available | - | 1626114 - 1626815 | 24818.5 |
| hypothetical protein | SAMN05421827_104117 | Not Available | + | 1626919 - 1627062 | 5385.51 |
| hypothetical protein | SAMN05421827_104118 | Not Available | + | 1627385 - 1628083 | 26581.6 |
| argininosuccinate synthase | SAMN05421827_104119 | Not Available | + | 1628085 - 1629281 | 44064.6 |
| cupin domain-containing protein | SAMN05421827_104120 | Not Available | + | 1629381 - 1629659 | 10511.7 |
| acetyltransferase (gnat) family protein | SAMN05421827_104121 | Not Available | + | 1629708 - 1630184 | 18049.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.