Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421827_104102 | Not Available | + | 1606880 - 1608550 | 65430.6 |
| putative hydrolase of the had superfamily | SAMN05421827_104103 | Not Available | - | 1608771 - 1609400 | 24123.9 |
| ytxh-like protein | SAMN05421827_104104 | Not Available | + | 1609480 - 1609707 | 7645.23 |
| metallo-beta-lactamase family protein | SAMN05421827_104105 | Not Available | + | 1609771 - 1611171 | 52154.6 |
| methyltransferase domain-containing protein | SAMN05421827_104106 | Not Available | + | 1611351 - 1612037 | 25921.8 |
| peptidase family m28 | SAMN05421827_104107 | Not Available | - | 1612110 - 1613249 | 41748.4 |
| hypothetical protein | SAMN05421827_104108 | Not Available | - | 1613665 - 1614603 | 36076.6 |
| uncharacterized iron-regulated membrane protein | SAMN05421827_104109 | Not Available | - | 1614612 - 1615829 | 46065.6 |
| uncharacterized conserved protein, contains gh25 family domain | SAMN05421827_104110 | Not Available | - | 1615904 - 1616614 | 26184.1 |
| iron complex outermembrane recepter protein | SAMN05421827_104111 | Not Available | - | 1616674 - 1619124 | 89689.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.