Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | SAMN05421827_10492 | Not Available | + | 1594055 - 1596187 | 79613.7 |
| hypothetical protein | SAMN05421827_10493 | Not Available | + | 1596628 - 1596849 | 8626.55 |
| iron complex outermembrane recepter protein | SAMN05421827_10494 | Not Available | + | 1596976 - 1600002 | 108439.0 |
| susd family protein | SAMN05421827_10495 | Not Available | + | 1600021 - 1601529 | 54907.7 |
| alpha,alpha-trehalase | SAMN05421827_10496 | Not Available | - | 1601632 - 1603206 | 60064.2 |
| nad dependent epimerase/dehydratase family protein | SAMN05421827_10497 | Not Available | + | 1603333 - 1604004 | 25234.4 |
| dual-action heigh metallo-peptidase | SAMN05421827_10498 | Not Available | - | 1604083 - 1604844 | 26947.1 |
| phage tail collar domain | SAMN05421827_10499 | Not Available | + | 1605134 - 1605373 | 8452.17 |
| hypothetical protein | SAMN05421827_104100 | Not Available | - | 1605434 - 1605613 | 6544.47 |
| 16s rrna (cytidine1402-2'-o)-methyltransferase | SAMN05421827_104101 | Not Available | - | 1605900 - 1606601 | 26209.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.