Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| beta-glucosidase | SAMN05421827_10472 | Not Available | - | 1575140 - 1576840 | 62549.0 |
| nicotinate-nucleotide adenylyltransferase | SAMN05421827_10473 | Not Available | - | 1576948 - 1577523 | 22166.8 |
| pin domain nuclease, a component of toxin-antitoxin system (pin domain) | SAMN05421827_10474 | Not Available | - | 1577666 - 1578049 | 15080.3 |
| protein of unknown function | SAMN05421827_10475 | Not Available | - | 1578049 - 1578252 | 7837.38 |
| guanylate kinase | SAMN05421827_10476 | Not Available | - | 1578288 - 1578857 | 21826.9 |
| tigr00255 family protein | SAMN05421827_10477 | Not Available | - | 1578926 - 1579801 | 33305.7 |
| hypothetical protein | SAMN05421827_10478 | Not Available | + | 1580321 - 1581064 | 28789.3 |
| hypothetical protein | SAMN05421827_10479 | Not Available | + | 1581069 - 1581785 | 27186.1 |
| hypothetical protein | SAMN05421827_10480 | Not Available | + | 1581792 - 1582502 | 26811.2 |
| ribonuclease-3 | SAMN05421827_10481 | Not Available | - | 1582821 - 1583549 | 27615.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.