Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| large subunit ribosomal protein l13 | SAMN05421827_10452 | Not Available | - | 1553443 - 1553886 | 16387.1 |
| hypothetical protein | SAMN05421827_10453 | Not Available | + | 1554084 - 1554881 | 29874.1 |
| orf6n domain-containing protein | SAMN05421827_10454 | Not Available | - | 1554902 - 1555435 | 20672.3 |
| nicotinamide mononucleotide transporter | SAMN05421827_10455 | Not Available | - | 1555516 - 1556178 | 25864.2 |
| mechanosensitive ion channel | SAMN05421827_10456 | Not Available | + | 1556566 - 1557405 | 32093.6 |
| hypothetical protein | SAMN05421827_10457 | Not Available | + | 1557628 - 1558083 | 16324.2 |
| uncharacterized protein | SAMN05421827_10458 | Not Available | - | 1558284 - 1560587 | 85414.4 |
| hypothetical protein | SAMN05421827_10459 | Not Available | - | 1560763 - 1561089 | 12605.8 |
| uncharacterized protein yjbi, contains pentapeptide repeats | SAMN05421827_10460 | Not Available | - | 1561133 - 1561705 | 21878.7 |
| hypothetical protein | SAMN05421827_10461 | Not Available | - | 1561730 - 1562206 | 18808.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.