Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421827_10440 | Not Available | + | 1545007 - 1545276 | 9345.37 |
| lrp/asnc family transcriptional regulator, regulator for asna, asnc and gida | SAMN05421827_10443 | Not Available | - | 1545362 - 1545838 | 17898.9 |
| laci family transcriptional regulator | SAMN05421827_10444 | Not Available | + | 1546461 - 1547486 | 38370.8 |
| ribosome recycling factor | SAMN05421827_10445 | Not Available | - | 1547546 - 1548109 | 20703.0 |
| uridylate kinase | SAMN05421827_10446 | Not Available | - | 1548148 - 1548852 | 25983.8 |
| 3',5'-cyclic-nucleotide phosphodiesterase | SAMN05421827_10447 | Not Available | - | 1548976 - 1549938 | 35832.3 |
| n-acetylglucosamine-6-phosphate deacetylase | SAMN05421827_10448 | Not Available | - | 1549949 - 1551040 | 39329.5 |
| elongation factor ts | SAMN05421827_10449 | Not Available | - | 1551227 - 1552072 | 29705.6 |
| small subunit ribosomal protein s2 | SAMN05421827_10450 | Not Available | - | 1552201 - 1553034 | 30849.3 |
| small subunit ribosomal protein s9 | SAMN05421827_10451 | Not Available | - | 1553053 - 1553439 | 14191.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.