Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acylphosphatase | SAMN05421827_10419 | Not Available | + | 1514096 - 1514368 | 10323.2 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN05421827_10420 | Not Available | + | 1514446 - 1515927 | 56639.6 |
| dutp pyrophosphatase | SAMN05421827_10421 | Not Available | + | 1516006 - 1516437 | 15570.8 |
| flp pilus assembly protein tadd, contains tpr repeats | SAMN05421827_10422 | Not Available | + | 1516480 - 1518180 | 64029.6 |
| protein of unknown function | SAMN05421827_10423 | Not Available | + | 1518158 - 1518949 | 29255.7 |
| septal ring factor envc, activator of murein hydrolases amia and amib | SAMN05421827_10424 | Not Available | + | 1519129 - 1520424 | 48611.2 |
| sec-independent protein translocase protein tata | SAMN05421827_10425 | Not Available | + | 1520471 - 1520833 | 13351.1 |
| sec-independent protein translocase protein tata | SAMN05421827_10426 | Not Available | + | 1520845 - 1521045 | 7024.77 |
| aspartyl-trna(asn)/glutamyl-trna(gln) amidotransferase subunit a | SAMN05421827_10427 | Not Available | + | 1521063 - 1522481 | 51373.3 |
| membrane-bound lytic murein transglycosylase d | SAMN05421827_10428 | Not Available | + | 1522688 - 1524091 | 52359.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.