Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| response regulator receiver domain-containing protein | SAMN05421827_1049 | Not Available | + | 1505452 - 1507929 | 94422.4 |
| two-component system, ntrc family, response regulator hydg | SAMN05421827_10410 | Not Available | - | 1507930 - 1509288 | 50415.8 |
| hypothetical protein | SAMN05421827_10411 | Not Available | - | 1509331 - 1509642 | 10996.2 |
| hypothetical protein | SAMN05421827_10412 | Not Available | - | 1509722 - 1510033 | 11223.5 |
| hypothetical protein | SAMN05421827_10413 | Not Available | - | 1510112 - 1510426 | 11264.5 |
| Trna-thr | Not Available | Not Available | + | 1510821 - 1510893 | Not Available |
| cytosine/adenosine deaminase | SAMN05421827_10415 | Not Available | + | 1511007 - 1512173 | 43984.9 |
| enoyl-[acyl-carrier protein] reductase ii | SAMN05421827_10416 | Not Available | + | 1512494 - 1513450 | 33848.2 |
| hypothetical protein | SAMN05421827_10417 | Not Available | - | 1513518 - 1513883 | 13889.1 |
| hypothetical protein | SAMN05421827_10418 | Not Available | + | 1513917 - 1514048 | 4727.73 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.