Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421827_103314 | Not Available | + | 1479844 - 1481043 | 46084.1 |
| oligosaccharide repeat unit polymerase | SAMN05421827_103315 | Not Available | + | 1481054 - 1482214 | 45020.6 |
| glycosyltransferase, gt2 family | SAMN05421827_103316 | Not Available | + | 1482214 - 1483068 | 33218.6 |
| rhamnosyltransferase | SAMN05421827_103317 | Not Available | + | 1483073 - 1484005 | 35204.2 |
| nucleoside-diphosphate-sugar epimerase | SAMN05421827_103318 | Not Available | + | 1484006 - 1484980 | 36290.5 |
| mannose-1-phosphate guanylyltransferase | SAMN05421827_103319 | Not Available | + | 1484992 - 1486068 | 39909.8 |
| undecaprenyl-phosphate galactose phosphotransferase/putative colanic acid biosysnthesis udp-glucose lipid carrier transferase | SAMN05421827_103320 | Not Available | + | 1486332 - 1487723 | 54073.2 |
| nucleotidyl transferase | SAMN05421827_103321 | Not Available | + | 1487736 - 1488653 | 34435.0 |
| hypothetical protein | SAMN05421827_103322 | Not Available | + | 1488766 - 1490394 | 61803.6 |
| 1-deoxy-d-xylulose-5-phosphate synthase | SAMN05421827_103323 | Not Available | - | 1490506 - 1492470 | 71502.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.