Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| long-chain fatty acid transport protein | SAMN05421827_103294 | Not Available | + | 1456470 - 1457783 | 48085.8 |
| hypothetical protein | SAMN05421827_103295 | Not Available | + | 1457783 - 1458355 | 21054.1 |
| peptidyl-prolyl cis-trans isomerase d | SAMN05421827_103296 | Not Available | + | 1458619 - 1460703 | 74986.6 |
| protein of unknown function | SAMN05421827_103297 | Not Available | + | 1460769 - 1461284 | 19230.2 |
| protein of unknown function | SAMN05421827_103298 | Not Available | + | 1461490 - 1462278 | 29853.0 |
| protein of unknown function | SAMN05421827_103299 | Not Available | + | 1462278 - 1462844 | 21525.9 |
| dtdp-glucose 4,6-dehydratase | SAMN05421827_103300 | Not Available | + | 1463056 - 1464108 | 39891.5 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | SAMN05421827_103301 | Not Available | + | 1464108 - 1464656 | 20346.1 |
| dtdp-4-dehydrorhamnose reductase | SAMN05421827_103302 | Not Available | + | 1464649 - 1465506 | 31036.9 |
| glucose-1-phosphate thymidylyltransferase | SAMN05421827_103303 | Not Available | + | 1465578 - 1466438 | 31354.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.