Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421827_103284 | Not Available | - | 1444910 - 1445830 | 34138.4 |
| protein of unknown function, duf393 | SAMN05421827_103285 | Not Available | - | 1445835 - 1446650 | 31231.1 |
| dna-binding transcriptional regulator gbsr, marr family | SAMN05421827_103286 | Not Available | - | 1446829 - 1447353 | 20082.5 |
| alginate lyase | SAMN05421827_103287 | Not Available | - | 1447395 - 1448480 | 41626.9 |
| membrane protein yfho | SAMN05421827_103288 | Not Available | + | 1448610 - 1451117 | 93591.5 |
| hypothetical protein | SAMN05421827_103289 | Not Available | + | 1451620 - 1451715 | 3773.58 |
| udp-2,3-diacylglucosamine pyrophosphatase lpxh | SAMN05421827_103290 | Not Available | + | 1451787 - 1452641 | 32894.7 |
| conserved hypothetical protein | SAMN05421827_103291 | Not Available | + | 1452662 - 1453651 | 38093.2 |
| hypothetical protein | SAMN05421827_103292 | Not Available | + | 1454621 - 1455601 | 38389.1 |
| type iii pantothenate kinase | SAMN05421827_103293 | Not Available | + | 1455755 - 1456489 | 26679.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.