Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein-tyrosine phosphatase | SAMN05421827_103274 | Not Available | - | 1434312 - 1434641 | 12924.4 |
| uracil phosphoribosyltransferase | SAMN05421827_103275 | Not Available | - | 1434707 - 1435351 | 23794.1 |
| hypothetical protein | SAMN05421827_103276 | Not Available | - | 1435440 - 1436708 | 49204.4 |
| hypothetical protein | SAMN05421827_103277 | Not Available | - | 1436844 - 1437353 | 19331.7 |
| hupe / urej protein | SAMN05421827_103278 | Not Available | + | 1437538 - 1438122 | 22170.0 |
| peptidase family m1 | SAMN05421827_103279 | Not Available | + | 1438134 - 1440506 | 89288.3 |
| hypothetical protein | SAMN05421827_103280 | Not Available | - | 1440629 - 1441789 | 43665.9 |
| excinuclease abc subunit b | SAMN05421827_103281 | Not Available | + | 1441972 - 1444014 | 77629.0 |
| conserved hypothetical protein | SAMN05421827_103282 | Not Available | + | 1444119 - 1444316 | 7186.62 |
| protein of unknown function | SAMN05421827_103283 | Not Available | + | 1444444 - 1444692 | 9484.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.