Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical protein | SAMN05421827_103263 | Not Available | - | 1425425 - 1425880 | 17167.1 |
| glycosyl transferase family 2 | SAMN05421827_103264 | Not Available | - | 1426007 - 1426924 | 35046.2 |
| methyltransferase domain-containing protein | SAMN05421827_103265 | Not Available | - | 1427116 - 1427877 | 29498.8 |
| dual-action heigh metallo-peptidase | SAMN05421827_103266 | Not Available | + | 1428138 - 1429520 | 49196.8 |
| methyltransferase, fkbm family | SAMN05421827_103267 | Not Available | + | 1429797 - 1430480 | 26182.5 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN05421827_103268 | Not Available | - | 1430481 - 1431806 | 49469.9 |
| hypothetical protein | SAMN05421827_103269 | Not Available | - | 1431882 - 1432013 | 4712.83 |
| dinb superfamily protein | SAMN05421827_103270 | Not Available | - | 1432055 - 1432573 | 19694.9 |
| protein of unknown function | SAMN05421827_103271 | Not Available | - | 1432593 - 1433297 | 27239.5 |
| putative hydrolase of the had superfamily | SAMN05421827_103272 | Not Available | - | 1433372 - 1434061 | 26711.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.