Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| l-ascorbate metabolism protein ulag, beta-lactamase superfamily | SAMN05421827_103243 | Not Available | - | 1400346 - 1401023 | 24792.8 |
| hypothetical protein | SAMN05421827_103244 | Not Available | - | 1401098 - 1401403 | 10754.9 |
| hypothetical protein | SAMN05421827_103245 | Not Available | - | 1401424 - 1402449 | 38420.6 |
| cubico group peptidase, beta-lactamase class c family | SAMN05421827_103246 | Not Available | - | 1402412 - 1403641 | 47102.5 |
| uncharacterized protein yjlb | SAMN05421827_103247 | Not Available | - | 1403710 - 1404261 | 20580.0 |
| uncharacterized conserved protein, duf885 familyt | SAMN05421827_103248 | Not Available | - | 1404537 - 1406315 | 66819.0 |
| pyruvate dehydrogenase e2 component (dihydrolipoamide acetyltransferase) | SAMN05421827_103249 | Not Available | - | 1406457 - 1408133 | 58291.7 |
| pyruvate dehydrogenase e1 component alpha subunit | SAMN05421827_103250 | Not Available | - | 1408164 - 1409159 | 37024.4 |
| lipoprotein spr | SAMN05421827_103251 | Not Available | + | 1409656 - 1410213 | 21013.1 |
| poly-gamma-glutamate biosynthesis protein capa/ywtb (capsule formation), metallophosphatase superfamily | SAMN05421827_103252 | Not Available | + | 1410412 - 1411509 | 40339.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.