Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methylated-dna-protein-cysteine methyltransferase related protein | SAMN05421827_103233 | Not Available | + | 1392176 - 1392508 | 12256.0 |
| hypothetical protein | SAMN05421827_103234 | Not Available | - | 1392498 - 1392857 | 13231.0 |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN05421827_103235 | Not Available | + | 1392910 - 1393263 | 13334.0 |
| dna-3-methyladenine glycosylase i | SAMN05421827_103236 | Not Available | + | 1393485 - 1394072 | 22578.2 |
| ribosomal-protein-alanine n-acetyltransferase | SAMN05421827_103237 | Not Available | + | 1394072 - 1394614 | 20871.1 |
| hypothetical protein | SAMN05421827_103238 | Not Available | - | 1394651 - 1395331 | 24709.8 |
| caax protease self-immunity | SAMN05421827_103239 | Not Available | + | 1395388 - 1396086 | 27661.9 |
| dna polymerase i | SAMN05421827_103240 | Not Available | + | 1396182 - 1398992 | 105037.0 |
| hypothetical protein | SAMN05421827_103241 | Not Available | + | 1399056 - 1399526 | 17446.0 |
| hypothetical protein | SAMN05421827_103242 | Not Available | + | 1399710 - 1400051 | 11898.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.