Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| xylose isomerase | SAMN05421827_103222 | Not Available | - | 1382095 - 1383426 | 49821.3 |
| xylulokinase | SAMN05421827_103223 | Not Available | - | 1383539 - 1385020 | 53966.2 |
| pp_01211 | SAMN05421827_103224 | Not Available | + | 1385210 - 1385545 | Not Available |
| trna(adenine34) deaminase | SAMN05421827_103226 | Not Available | + | 1385796 - 1386263 | 17454.1 |
| superoxide dismutase, fe-mn family | SAMN05421827_103227 | Not Available | + | 1386538 - 1387146 | 22449.5 |
| hypothetical protein | SAMN05421827_103228 | Not Available | + | 1387242 - 1387703 | 17554.1 |
| lysr family transcriptional regulator, hydrogen peroxide-inducible genes activator | SAMN05421827_103229 | Not Available | - | 1388012 - 1388944 | 35032.0 |
| predicted glycosyl hydrolase, gh43/duf377 family | SAMN05421827_103230 | Not Available | + | 1389172 - 1390299 | 42269.8 |
| gdp-l-fucose synthase | SAMN05421827_103231 | Not Available | - | 1390486 - 1391412 | 34678.6 |
| trna (guanine-n7-)-methyltransferase | SAMN05421827_103232 | Not Available | + | 1391526 - 1392176 | 25027.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.