Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421827_103211 | Not Available | + | 1372317 - 1372964 | 24462.5 |
| hypothetical protein | SAMN05421827_103212 | Not Available | - | 1372976 - 1373158 | 6958.51 |
| tetratricopeptide repeat-containing protein | SAMN05421827_103213 | Not Available | + | 1373677 - 1375080 | 54704.8 |
| phosphosulfolactate synthase | SAMN05421827_103214 | Not Available | + | 1375141 - 1375908 | 28597.4 |
| shikimate dehydrogenase | SAMN05421827_103215 | Not Available | + | 1375993 - 1376736 | 27446.9 |
| gliding motility-associated lipoprotein gldd | SAMN05421827_103216 | Not Available | + | 1376814 - 1377401 | 23285.9 |
| glyoxylase, beta-lactamase superfamily ii | SAMN05421827_103217 | Not Available | + | 1377450 - 1378088 | 23536.0 |
| lipoprotein-releasing system permease protein | SAMN05421827_103218 | Not Available | + | 1378261 - 1379412 | 42466.1 |
| nlpe-like protein with ob domain | SAMN05421827_103219 | Not Available | + | 1379414 - 1379797 | 14133.9 |
| solute:na+ symporter, sss family | SAMN05421827_103221 | Not Available | - | 1380233 - 1381900 | 60775.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.