Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05421827_103201 | Not Available | - | 1355917 - 1356486 | 22631.3 |
| glpgli family protein | SAMN05421827_103202 | Not Available | - | 1356584 - 1357357 | 29230.0 |
| outer membrane protein beta-barrel family protein | SAMN05421827_103203 | Not Available | - | 1357411 - 1360221 | 104368.0 |
| hypothetical protein | SAMN05421827_103204 | Not Available | + | 1360509 - 1361147 | 22872.3 |
| aldehyde dehydrogenase (nad+) | SAMN05421827_103205 | Not Available | - | 1361290 - 1362831 | 54703.4 |
| hypothetical protein | SAMN05421827_103206 | Not Available | + | 1362949 - 1363827 | 32898.1 |
| aminopeptidase n | SAMN05421827_103207 | Not Available | + | 1363907 - 1366414 | 93542.5 |
| protein of unknown function | SAMN05421827_103208 | Not Available | - | 1366508 - 1367404 | 31836.7 |
| starch-binding associating with outer membrane | SAMN05421827_103209 | Not Available | - | 1367418 - 1368920 | 55539.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421827_103210 | Not Available | - | 1368937 - 1372047 | 113645.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.