Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter, acs family, hexuronate transporter | SAMN05421827_103191 | Not Available | + | 1340201 - 1341646 | 53425.4 |
| acyl-coa reductase | SAMN05421827_103192 | Not Available | + | 1341768 - 1343393 | 60337.8 |
| lysophospholipase l1 | SAMN05421827_103193 | Not Available | - | 1343837 - 1344577 | 27359.9 |
| pectinesterase | SAMN05421827_103194 | Not Available | - | 1344582 - 1345685 | 41362.5 |
| protein of unknown function | SAMN05421827_103195 | Not Available | - | 1345694 - 1347346 | 57879.8 |
| starch-binding associating with outer membrane | SAMN05421827_103196 | Not Available | - | 1347367 - 1349211 | 67942.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421827_103197 | Not Available | - | 1349230 - 1352460 | 118308.0 |
| laci family transcriptional regulator | SAMN05421827_103198 | Not Available | + | 1352724 - 1353734 | 37716.3 |
| 23s rrna (cytosine1962-c5)-methyltransferase | SAMN05421827_103199 | Not Available | + | 1353910 - 1355094 | 44035.6 |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN05421827_103200 | Not Available | - | 1355206 - 1355640 | 16262.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.