Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aspartyl-trna synthetase | SAMN05421827_103171 | Not Available | - | 1315470 - 1317215 | 66102.1 |
| hypothetical protein | SAMN05421827_103172 | Not Available | - | 1317570 - 1317974 | 15666.9 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421827_103173 | Not Available | + | 1318660 - 1319169 | 19919.8 |
| hypothetical protein | SAMN05421827_103174 | Not Available | + | 1319162 - 1319689 | 20203.7 |
| hypothetical protein | SAMN05421827_103175 | Not Available | + | 1319835 - 1321121 | 46168.5 |
| peroxiredoxin | SAMN05421827_103176 | Not Available | + | 1321160 - 1321732 | 21625.5 |
| putative membrane protein | SAMN05421827_103177 | Not Available | - | 1321923 - 1322813 | 34221.4 |
| sugar transporter | SAMN05421827_103178 | Not Available | + | 1322964 - 1324487 | 55720.8 |
| hypothetical protein | SAMN05421827_103179 | Not Available | + | 1324493 - 1324744 | 9689.07 |
| lysophospholipase l1 | SAMN05421827_103180 | Not Available | - | 1324775 - 1325566 | 29832.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.