Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidase family m49 | SAMN05421827_103161 | Not Available | - | 1305388 - 1307145 | 65623.0 |
| n-acetylmuramoyl-l-alanine amidase | SAMN05421827_103162 | Not Available | + | 1307184 - 1308020 | 31014.2 |
| glutaminyl-trna synthetase | SAMN05421827_103163 | Not Available | - | 1308292 - 1309947 | 63420.0 |
| methylmalonyl-coa mutase, c-terminal domain | SAMN05421827_103164 | Not Available | + | 1310209 - 1310631 | 15332.9 |
| enoyl-coa hydratase | SAMN05421827_103165 | Not Available | + | 1310635 - 1311414 | 27614.3 |
| two-component system, ntrc family, response regulator hydg | SAMN05421827_103166 | Not Available | + | 1311562 - 1312980 | 52765.8 |
| predicted purr-regulated permease perm | SAMN05421827_103167 | Not Available | + | 1313045 - 1314094 | 39339.5 |
| gas vesicle protein | SAMN05421827_103168 | Not Available | + | 1314166 - 1314432 | 9386.0 |
| putative holin-x, holin superfamily iii | SAMN05421827_103169 | Not Available | + | 1314487 - 1314864 | 14098.2 |
| hypothetical protein | SAMN05421827_103170 | Not Available | + | 1314851 - 1315288 | 16429.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.