Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidase family m28 | SAMN05421827_103151 | Not Available | + | 1289868 - 1291175 | 48016.3 |
| carbamoyl-phosphate synthase large subunit | SAMN05421827_103152 | Not Available | - | 1291337 - 1294174 | 104882.0 |
| hypothetical protein | SAMN05421827_103153 | Not Available | - | 1294383 - 1294700 | 11082.7 |
| nicotinamide-nucleotide adenylyltransferase, nadr type | SAMN05421827_103154 | Not Available | + | 1295112 - 1295666 | 21268.5 |
| iron complex outermembrane recepter protein | SAMN05421827_103155 | Not Available | + | 1296539 - 1298950 | 89734.9 |
| thiamine-phosphate pyrophosphorylase | SAMN05421827_103156 | Not Available | + | 1299090 - 1299734 | 23588.2 |
| hypothetical protein | SAMN05421827_103157 | Not Available | + | 1299873 - 1301087 | 46745.7 |
| hypothetical protein | SAMN05421827_103158 | Not Available | + | 1301151 - 1301711 | 21141.1 |
| ribosomal protein s18 acetylase rimi | SAMN05421827_103159 | Not Available | + | 1301708 - 1302202 | 18591.5 |
| outer membrane receptor proteins, mostly fe transport | SAMN05421827_103160 | Not Available | - | 1302329 - 1304770 | 91201.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.