Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| galactose mutarotase | SAMN05421827_103141 | Not Available | - | 1278806 - 1279672 | 33282.4 |
| tripeptide aminopeptidase | SAMN05421827_103142 | Not Available | - | 1279777 - 1281030 | 46072.7 |
| hypothetical protein | SAMN05421827_103143 | Not Available | + | 1281090 - 1281821 | 27322.6 |
| zinc carboxypeptidase | SAMN05421827_103144 | Not Available | + | 1281832 - 1283592 | 66864.2 |
| membrane associated serine protease, rhomboid family | SAMN05421827_103145 | Not Available | + | 1283600 - 1284214 | 23148.6 |
| hypothetical protein | SAMN05421827_103146 | Not Available | - | 1284314 - 1285297 | 38087.9 |
| hypothetical protein | SAMN05421827_103147 | Not Available | - | 1285430 - 1286566 | 43708.3 |
| l-alanine-dl-glutamate epimerase | SAMN05421827_103148 | Not Available | + | 1286641 - 1287672 | 38301.5 |
| rhodanese-related sulfurtransferase | SAMN05421827_103149 | Not Available | - | 1288119 - 1288436 | 11946.3 |
| protein of unknown function | SAMN05421827_103150 | Not Available | + | 1288565 - 1289689 | 42581.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.