Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thiazole synthase | SAMN05421827_103130 | Not Available | - | 1270179 - 1270949 | 27422.3 |
| thiamine-phosphate pyrophosphorylase | SAMN05421827_103131 | Not Available | - | 1270961 - 1271596 | 22649.6 |
| thiamine-phosphate pyrophosphorylase | SAMN05421827_103132 | Not Available | - | 1271619 - 1272206 | 22492.1 |
| phosphomethylpyrimidine synthase | SAMN05421827_103133 | Not Available | - | 1272213 - 1274216 | 75097.4 |
| sulfur carrier protein | SAMN05421827_103134 | Not Available | - | 1274230 - 1274433 | 7299.74 |
| abc transporter | SAMN05421827_103136 | Not Available | + | 1274955 - 1275233 | 10167.4 |
| abc transporter | SAMN05421827_103137 | Not Available | + | 1275362 - 1275673 | 11395.6 |
| leucine-rich repeat (lrr) protein | SAMN05421827_103138 | Not Available | + | 1275725 - 1277023 | 47520.3 |
| hypothetical protein | SAMN05421827_103139 | Not Available | - | 1277258 - 1277953 | 26605.9 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05421827_103140 | Not Available | + | 1278089 - 1278655 | 21990.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.