Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN05421827_10390 | Not Available | + | 1217855 - 1221001 | 113770.0 |
| starch-binding associating with outer membrane | SAMN05421827_10391 | Not Available | + | 1221027 - 1222535 | 54978.6 |
| protein of unknown function | SAMN05421827_10392 | Not Available | + | 1222550 - 1223476 | 32698.9 |
| hypothetical protein | SAMN05421827_10393 | Not Available | - | 1223601 - 1224302 | 26576.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421827_10394 | Not Available | + | 1224826 - 1227993 | 113173.0 |
| susd family protein | SAMN05421827_10395 | Not Available | + | 1228011 - 1229501 | 53843.2 |
| putative oxidoreductase | SAMN05421827_10396 | Not Available | - | 1229571 - 1229978 | 14401.4 |
| muramoyltetrapeptide carboxypeptidase | SAMN05421827_10397 | Not Available | - | 1229980 - 1230879 | 33415.4 |
| methionyl-trna synthetase | SAMN05421827_10398 | Not Available | + | 1230920 - 1233028 | 79751.9 |
| uncharacterized oxidoreductase | SAMN05421827_10399 | Not Available | - | 1233112 - 1233834 | 26228.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.