Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative holliday junction resolvase | SAMN05421827_10380 | Not Available | - | 1198049 - 1198465 | 15695.1 |
| dna polymerase-3 subunit delta' | SAMN05421827_10381 | Not Available | + | 1199089 - 1200237 | 42948.9 |
| cell fate regulator yaat, psp1 superfamily (controls sporulation, competence, biofilm development) | SAMN05421827_10382 | Not Available | + | 1200239 - 1201777 | 57298.1 |
| gliding motility-associated lipoprotein gldh | SAMN05421827_10383 | Not Available | + | 1201746 - 1202228 | 18747.6 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | SAMN05421827_10384 | Not Available | - | 1202253 - 1203554 | 47995.1 |
| zinc carboxypeptidase | SAMN05421827_10385 | Not Available | + | 1203641 - 1206136 | 93853.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421827_10386 | Not Available | + | 1206948 - 1210169 | 116200.0 |
| starch-binding associating with outer membrane | SAMN05421827_10387 | Not Available | + | 1210186 - 1211613 | 51752.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421827_10388 | Not Available | + | 1212394 - 1215534 | 114044.0 |
| starch-binding associating with outer membrane | SAMN05421827_10389 | Not Available | + | 1215556 - 1217010 | 53779.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.