Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutamate-5-semialdehyde dehydrogenase | SAMN05421827_10360 | Not Available | + | 1178223 - 1179470 | 45073.9 |
| metallo-beta-lactamase family protein | SAMN05421827_10361 | Not Available | - | 1179724 - 1181106 | 51618.3 |
| hypothetical protein | SAMN05421827_10362 | Not Available | - | 1181195 - 1181539 | 13645.2 |
| hypothetical protein | SAMN05421827_10363 | Not Available | + | 1181632 - 1181886 | 9840.26 |
| putative intracellular protease/amidase | SAMN05421827_10364 | Not Available | - | 1181940 - 1182620 | 24723.4 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05421827_10365 | Not Available | - | 1182708 - 1183277 | 22238.8 |
| hypothetical protein | SAMN05421827_10366 | Not Available | - | 1183390 - 1183764 | 13578.1 |
| hypothetical protein | SAMN05421827_10367 | Not Available | - | 1184146 - 1184748 | 23508.0 |
| hypothetical protein | SAMN05421827_10368 | Not Available | - | 1184790 - 1185509 | 26996.1 |
| magnesium chelatase family protein | SAMN05421827_10369 | Not Available | - | 1185635 - 1187173 | 56072.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.